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<title>BACA</title>
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<form action="/cgi-bin/geno.pl">
<table align="center">
<tr>
<td align="center" colspan="3"><h1>BACA<h1></2>
</tr>
<tr>
<td colspan=3>
<br/>
<b>Before you use BACA you might want to read our
<a href='http://cibio.up.pt/software/baca/tut.html'>Tutorial</a></b>.
<br/>
<br/>
We always add the string ' AND mitochondrion[TITL]' to your
query in order to restrict data download to mitochondria only.
<br/><br/>
Please note that an SVG capable browser is recommended! Firefox and
Opera (recent versions) are both SVG enabled. Plug-ins like the one
available from Adobe are normally not enough as they do not have
all the needed features.
<br/><br/>
Example queries might be:
<pre>
txid8459[Organism:exp]
txid9347[Organism:exp] NOT NC_001807
txid39107[Organism:exp]
</pre>
If you do not like GenBank <a href='http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi'>tax id</a> you can use 'normal' names like
<pre>
Murinae
Pecora
</pre>
Just be careful and guarantee that you query includes really what you want.
For instance, if you use more than one word do not forget boolean operators (AND, OR, ...) as GenBank requires them.
<br/><br/>
<b>He strongly recommend you to supply an email address.</b>
<br/>In that case
you won't need to wait on the web page for the results to complete (it
can take quite some time, especially if the query results are many
and the network is slow).
<br/><br/>
</td>
</tr>
<tr>
<td>Email address</td>
<td align="center" colspan="2">
<input type="text" name="email" />
</td>
</tr>
<tr>
<td>GenBank query</td>
<td colspan="2"><input type="text" name="query" size="40" value='txid8459[Organism:exp]'/></td>
</tr>
<tr>
<td><input type="checkbox" name="gene" checked>Gene</td>
<td><input type="checkbox" name="trna" checked>tRNA</td>
<td><input type="checkbox" name="rrna" checked>rRNA</td>
</tr>
<tr>
<td><input type="checkbox" name="stemloop" checked>stem loop</td>
<td><input type="checkbox" name="origin" checked>Origin</td>
<td><input type="checkbox" name="dloop" checked>D-Loop</td>
</tr>
<tr>
<td align="center" colspan="3">
<input type="checkbox" name="vert" checked>Vertebrate mitochondrial genetic code
<br/>(uncheck for Invertebrate)
</td>
</tr>



<tr>
<td align="center" colspan="3">
<input type="submit" value="Retrieve" />
</td>
</tr>
</table>
</form>
